Monday, January 6, 2014

Scientism - its Fatal Flaw


Well, *I* believe in SCIENCE!

Heard that before? It's certainly nothing new - it goes back to at least Voltaire.

Scientism is an expression in use for most of the 20th Century, and is often used to refer to science applied in excess - or applied unreasonably. The term scientism can generally apply in either of two ways:
  1. To indicate the improper usage of science or of scientific claims,  
  2. To refer to a belief that methods of natural science form the only proper elements in any inquiry.
In a broader sense, scientism is also used to describe the invocation of science as a focus of worship, generally by people who would describe themselves as atheists. It's sort of like Methodism, or Daoism, or... you can fill in the blanks here.

Two recent articles, "Lies, Damned Lies, and Medical Science", and "Trouble at the Lab" draw some obvious and frightening conclusions about this approach or life view.

John Ioannidis, a physician and mathematician, published two seminal articles in 2005. They are among the most-cited papers in all of modern science - and they are incredibly embarrasing to scientists. In the first paper, Ioannidis convincingly showed why 80 percent of non-randomized scientific studies turn out to be wrong. Fully 25 percent of supposedly gold-standard (and thus far more expensive) clinical trials gave incorrect results. It is from studies like this that the medical doctors that you and I seek help from base their diagnoses and treatment protocols. Our lives depend on these being correct. These incorrect results include recommendations to use hormone-replacement therapy in post-menopausal women, that mammograms and PSA tests are critical for extending lives, that anti-depressants such as Prozac, Zoloft, and Paxil can help depression, that doing puzzles will ward off Alzheimers Disease, and that drinking lots of water during intense exercise is helpful.

The problem? Not one of these turns out to be true. THOUSANDS of stories in magazine articles have been written based on these published studies. The number of studies that contradict other studies of the same thing are so high that The Week magazine actually has a section called "Health Scare of the Week".

Many physicians, on their own, have discovered that just taking a patient off of every drug can improve their health immediately.

The truly glaring problem: the large majority of these studies cannot be replicated. This means that other groups cannot repeat the same experiments and get the same results. Amgen, an American drug company, tried to replicate 53 landmark studies in basic research on cancer. They were able to reproduce the results on just 11 percent of the studies. In a separate study done by Bayer, the German pharmaceutical company, only 25% of published results could be reproduced. These analyses aren't being published by disgruntled scientists, but by editors in the premier of all science journals: Nature. Dr. Ioannidis says that between a third to a half of  medical research results has been shown to be untrustworthy. He suggests that physicians, when faced with all this potentially lethal error and confusion... simply ignore them all!

Ioannidis' second paper explains why these flawed studies happen and get published in peer-reviewed journals. Without belaboring the details (you can read them yourself), it comes down to many things - but things that compound themselves:
  • The "publish or perish" ethos for young scientists to get tenure or grants
  • Ignorance of what constitutes statistical significance among most scientists
  • Ego
  • Fear of reprisals by peers or superiors
  • The tendency of scientific journals to publish almost exclusively "new" and "exciting" discoveries
  • Bias in research study design, bias in analysis, self-serving interpretation
  • Fraud.
This latter issue is interesting, and when identified firmly it is supposed to lead to retractions of published articles. However, a University of Edinburgh study of 21 confidential surveys of scientists worldwide found that only 2 percent of them admitted to falsifying or fabricating data - but 28 percent said they knew of colleagues who engaged in these practices! If that difference hints to you at a broader problem, then give yourself three stars.

The problem with Scientism is that it falls for the oldest trick in the book: it worships at the feet of the Golden Calf. One of several modern versions of the Golden Calf is Science. But like all man-made things, their faith is based on something that is fatally flawed. It is very, very human.

Are we advocating that people not trust science? Absolutely not - just don't bet your life on it, and certainly don't pour your faith and belief into it! Science is still far better and more honest than the The Talking Heads and Corporate Paid Pundits on talk radio or "fair and unbiased" news channels.
~~~~~

Friday, January 3, 2014

Rocks drying?

Some questions to Ask-a-Geologist are so off-the-wall that they rock me back on my heels and make me really think. Here's an example:

Q: is there a type of rock that dries faster than another?
- Shea P.

A: That's an interesting - and delightfully atypical - question. There are at least two issues involved:
  1. 1. The rugosity (or ruggedness) of the rock's surface. The smoother it is (like obsidian), the less surface is exposed to water and the less available in the way of nooks and crannies to trap and hold water. A sandstone would likely keep some moisture on it's surface longer than obsidian would.
  2. The surface tension/hydration of the rock's minerals. Certain minerals like clays adsorb (some also absorb) water on their surfaces in a pretty strong manner. Bentonite, for instance, will expand on contact with water and it takes forever to dry it out. When I lived in Denver I noticed that the ground sloped up to foundations of our tiny new house. I was emphatically warned by the realtor to not disturbed that grading. If water got under the eaves of my house, he told me, it could be funneled up against the side, and I could get heaving and major cracks in the basement walls as the swelling clay crushed into the concrete.
There's more to the issue than this, of course - there are other variables that include:
  • Is the entire rock in contact with air, or is some of it buried? 
  • What is the humidity of the air? 
  • Is the air circulating?
As an example of how important these are, I was once working in the Saudi Arabian desert. After a day in 40+ C temperatures, I felt sticky with dried sweat, and was determined to bathe. We carried plenty of water with us... but we were also being engulfed in a three-day sandstorm at the time. It was dark, so I took a 5-gallon Jerry can of water, a metal chair, and a towel about 100 meters out into the desert. I tied my clothes to the metal chair to keep them from blowing away, and used a heavy metal sauce-pan to load and pour water over myself. I lathered up and then poured more water over my hair and body to get the soap off. The wind was blowing so hard that I felt stinging sand up to my chest... and realized that I needed no towel after all. The air was so dessicated and moving so strongly that I was dry almost immediately.
~~~~~

Tuesday, December 31, 2013

Masaya

Anyone who has read 3 Nephi 8, especially if they are aware of some of the details of Mount St Helens' 1980 eruption, have pondered expressions such as "...there were exceedingly sharp lightnings...", "...the city of Moroni did sink into the depths of the sea...", "...the whole face of the land was changed...", "...there was darkness upon the face of the land...", and the "...the inhabitants thereof who had not fallen could feel the vapor of darkness..." that engulfed the Nephites nearly 2,100 years ago.

Central America, of course, is an integral part of the Pacific Ring of Fire, so-called because of the string of volcanoes that all lie just inland from the Pacific Ocean margins. The Ring includes hundreds of volcanoes, among them the huge Cerro Hudson in southern Chile, Masaya in Nicaragua, Shasta in California, Mount Rainier in Washington, Mount Edgecumbe near Sitka, Alaska, and Kenai and Veniaminof, the monster volcanoes of the Aleutians. Farther east, on the other side of the Pacific Ocean, the Ring of Fire includes Bezymiani, Sheveluch, and Mutnovski-Gorely in Kamchatka, and Alaid and others in the Kuriles. The Ring includes Usu, Fuji, and Sakura-Jima, the best-known volcanoes in Japan. We can't leave out Mount Pinatubo in the Philippines, whose 1992 eruption lowered the world wide temperature by two degrees centigrade, and we must include the long arc of volcanoes in Indonesia, including the monster Toba. The phenomenal eruption of the Toba supervolcano around 72,000 years ago may have reduced the proto-human population on Earth to as few as 2,500 individuals.

All these volcanoes (except for Indonesia) lie just inland of the Pacific Ocean margins because they lie just above their sources: the down-going Pacific Ocean seafloor that is being over-ridden by continental margins all around it. Linking the over-riding continental plates with their subducted oceanic plate are huge subduction faults. These are the sources of the largest earthquakes in Earth's recorded history, including the magnitude 9.5 Valdivia earthquake of 1960 in Chile (whose tsunami destroyed downtown Hilo, Hawai'i, about 8 hours later). Other subduction earthquakes include the magnitude 8.7 to 9.2 Cascadia event of 1700, which sank an entire forest in Puget Sound, and whose "Orphan Tsunami" destroyed villages on the Japanese east coast. The magnitude 9.0 Tohoku Earthquake of 2010 triggered the meltdown of the Fukushima-Di-Ichi nuclear plant and devastated the northeastern Japanese coast. The huge magnitude 8.6 Aceh subduction earthquake of 2004 created a tsunami that killed at least 250,000 people along the Indian Ocean margins.

During the Spanish era, regional Central American capitals such as Santiago de Guatemala and Nicaragua, Honduras, were repeatedly destroyed and rebuilt. To say that earthquakes and related volcanic tephra-falls changed the face of the land in Central America would be an understatement.

Since the 1963 eruption that created the island of Surtsey, Iceland, and the 1980 eruption of Mount St Helens, volcanologists have known that lightning storms are closely associated with Plinian eruptions. This is because of the vast electric charge lofted along with the prodigious amounts of volcanic ash that are transported to the stratosphere.

But what caused the "vapor of darkness" described by Nephi? This was almost certainly a smothering blanket of volcanic ash. Mount St Helens, 1980, was a relatively small (VEI 5) eruption. It lofted about 3 cubic kilometers of material, and left nearly a meter-thick blanket of ash in Yakima, Washington, 244 kilometers to the east, within a few hours of its eruption.

To get a handle on a smoking gun for 3Ne:8, we must examine the largest volcanic eruptions in Central America. One way to do this is to accumulate information on tephra falls that reached out great distances - the larger the reach, the greater the eruption. Two events stand out:

  • Masaya volcano, Nicaragua, about 2,100 years ago, left tephra as far as 170 km distant.
  • Chiletepe volcano, Nicaragua, about 1,900 years ago, left tephra as far as 570 km distant.
Note that these dates are somewhat approximate (they come from Kutterolf et al, 2008, Geochemistry, Geophysics, Geosystems). The Masaya eruption lofted approximately 8 cubic kilometers of ash and tephra, nearly three times more than Mount St Helens. Interestingly, ancient human footprints have been found at Acahualinca - these are 2,100-year-old fossils discovered along the shores of Lake Managua, Nicaragua, frozen in the volcanic ash from Masaya. Both these volcanoes lie eastward of the subduction zone where the Cocos Plate is being over-ridden by the Caribbean Plate at a rate of nearly 7 cm/year. This rate is nearly three times faster than the Cascadia subduction rate, which means that there are proportionally more frequent earthquakes and volcanic eruptions in Nicaragua than in Washington and Oregon. 

I'm just struck by that name: Masaya. 

~~~~~

Friday, December 27, 2013

Adventure

For Bilbo Baggins, an Adventure made life worth living.

For many human beings, adventure is often just being able to claim you were that first at something: the first on a new pitch at Smith Rocks, Oregon, the first to summit K2 in Nepal, the first to free-climb Half Dome in Yosemite...

There are several books at home that I cherish, including

  • "Undaunted Courage" - the Lewis and Clark expedition,
  • "Sailing Alone Around the World" - Joshua Slocum's first one-man circumnavigation of the Earth,
  • "Tigrero" - Alexander Siemel's hunt for man-eating Jaguars in Brazil's Matto Grosso,
  • "Endurance" - Earnest Shackleton's Antarctic expedition and Worsely's incredible navigation across 800 miles of the terrible Southern Ocean to South Georgia Island.
There are others, but these are the ones I re-read every couple of years.

I have pondered a definition of "Adventure."  In my opinion it means going off to someplace where few if any have gone.  It does NOT mean a day-trip, or going somewhere that a cell-phone can call for help from. Importantly, it means going someplace where you are on your own.  If something goes bad, it's up to you and your expedition members to work out your own survival. Fail, and there is no record of the fact that you perished - or like the Franklin Expedition to seek the Northwest Passage, archeologists reconstruct your grim demise a century later. 


According to this definition, I and many of our family members have had some adventures:

  1. My first, 10-day sojourn in the deep Amazonas forest of southern Venezuela. It was full of amazing wonders, but I nearly died.
  2. Jared, Val, and I hiked to - and summited - Mount Roraima ("The Mother of Waters") on the Venezuelan, Guyana, and Brazilian triple-frontier. The trip covered over 50 kilometers on foot, and the last pitch required climbing a crack up a 700-meter (2,000-foot) cliff to an eerie Moonscape at 3,000 meters (9,600 feet) elevation.  Wearing T-shirts, we were promptly engulfed in a sleet-storm. 
  3. Louise and Lisa made that same trip the following year - Lisa wore flip-flops most of the way.
  4. Louise and Val hiked to the great Auyantepuy - the greatest cliff-sided mountain on Earth - and climbed it - and both nearly drowned in Devil's Canyon on the way.
  5. My first trip into the roadless Amazonas Territory of southern Venezuela. I was nearly consumed by insects on this trip, but the real sticker was an encounter with a pair of murderous bandits... who counted us at least three times before they decided there were too many of us (about 20) to cleanly kill. Our Venezuelan counterparts also reminded the bandits that we were American diplomats - and there would certainly be follow-up if we didn't return. 
  6. The first Summer Crossing of the Empty Quarter (there are only a handful of true crossings on record). This required driving 1,700 kilometers (over 1,000 miles) over continuous sand dunes in the hottest desert on earth - even Bedouin only venture into the fringes, and only in winter. Neither fixed-wing nor rotary aircraft can venture into this desolate place; we had only intermittent HF radio contact with the outside world. We camped one night in northern Yemen during its 1994 Civil War - because the Saudi border map placed one guard-post fully 72 kilometers (45 miles) from where it actually was. I completed a magnetic survey over an asteroid-impact site called Wabar when the temperature reached 61 degrees C (142 degrees F) - and according to my companions, was unconscious for 20-30 minutes from heat-stroke afterwards. The next day we visited a "weather station" that was so radioactive that my Geiger Counter went off-scale at its highest setting when my back was against the outside wall.
  7. The first overnight camping expedition inside Mount St Helens volcano, just as the 2004 - 2006 eruption was ending. I did this to help a crew of desperate geophysicists, but unlike them I chose to walk out, and not take the return helicopter. This meant hiking in incredibly-dissected, unconsolidated boulder fields for nearly 20 kilometers with a 30-kg backpack. I lost a toe-nail and blew out a knee doing it, and no, there was no cell-phone reception. 

I have cherished photos of these trips, and the book Louise and I wrote about Venezuela has 45 photos in it, many from other-worldly Mount Roraima. We made many more wilderness trips, but in most (but not all) cases we had cell-phone or sat-phone access in case of an emergency.

But here's the thing about adventure: there is the up-side (the excitement, the discovery), but there is also a downside: danger, perhaps death. My personal journal while in Venezuela is full of annotations like "I was nearly killed again today..."

If you push the statistical envelope by doing this too often, You. Will. Die.

~~~~~

Sunday, December 22, 2013

Earthquakes only during the day?

According to my calculations, the 6th grade means students are around 11-12 years old. If so, then the Rising Generation is full of people a lot smarter than I was at that age. The question below from Ask-a-Geologist is just one of many like it:
Q: Dear Geologist,



Our name is Arianah and Cray and we are sixth grade students at Preston Middle School in fort Collins, Colorado. We are currently learning about how the Earth’s surface changes over time. We are curious about earthquakes. We have a couple questions for you. Is there a common time when earthquakes happen during the day? Also, why did you become a geologist?

Yours sincerely, Arianah and Cray :D
A:
1. Earthquakes are essentially random. We understand why they happen, we understand where they happen, but we do NOT understand WHEN they will happen. There are always aftershocks following a main event, of course, but the main event cannot be predicted. Extensive research has shown that there is no correlation between earthquakes and certain times of the day or external * events - for instance there is no correlation with either the location of the Sun, or of the Moon, or with tides (alignments of celestial bodies, which cause neap tides or spring tides, is called syzygy). Some of the brightest minds on this planet have been searching for more than a half century for some evidence that main event earthquakes can be predicted, but without success. They can be forecast #, but not predicted.
2. I was a solid-state physicist and realized that if I didn’t do something drastic, I would be stuck inside a laboratory all my life with radioactive sources and high-pressure cells. This was brought very much to my attention one day when I had a high-pressure cell blow out and spew Cobalt-60 all over the inside of our lab, and had to call in a special Spill Team. Also, by this time physics as a profession was drifting into a dead end with string theory, and I saw relatively little value to humanity to spending billions of dollars to see if another exotic particle existed. I checked out break-offs of physics, including astrophysics, hydro-geophysics, weather physics, and geophysics, and found the last one to be very exciting. It also got me out into exotic places, like the Venezuelan jungle, the southeastern Alaska panhandle, the Empty Quarter of Saudi Arabia, etc. Geoscience gives me amazing opportunities to visit these places and many more. But even more interesting to me is to be a detective – to be the first to discover something beneath the ground or the seafloor. I was the first to say where the groundwater was beneath the San Pedro Basin in Arizona and Sonora, Mexico, and the first to map where titanium sands lay beneath the seafloor off the coast of South Africa. That’s ever so cool.
* It has been shown that if you inject fluids into certain formations (e.g., deep sediments northeast of Denver, CO), you can trigger swarms of micro-earthquakes. Basically this is the ground shuddering to equilibrate and adjust itself to a slightly new stress regime. However these sorts of events are so small that they are almost never felt.They really are not earthquakes as the general public understands earthquakes.
# A forecast: in other words, there is an X% chance that there will be a magnitude Y event on the Z fault zone in northern California within the next 30 years. This is very, very different from saying that there will be a Magnitude Y event at Z location on X day - that would be a prediction. We can't do that.
~~~~~

Friday, November 29, 2013

If there was ever a tornado going on when a volcano is erupting…


Then there are questions that could only come from children who are learning, but haven't learned much, and have no fear about asking questions about things that are scarey/fascinating to them. The following "improbable" is actually not that far from the probable.

Q: Hello my name is Thorin and i have a question for my geography class.

If there was ever a tornado going on when a volcano is erupting, can the tornado, so to speak, pick up the lava erupting from the volcano. I hope you guys respond to my question.  Thanks, - Thorin T

A: Hi Thorin,

Tornadoes don't usually occur where there are volcanoes. Tornadoes generally require pretty flat terrain or ocean (not common in volcano territory) and a complex mix of warm and moist air, with cold and dry air coming from another direction. Again, this is not common in volcano territory like the Pacific Cascades, Kamchatka, or Japan. That said, however, it has been reported that tornadoes can pick up cars and carry them hundreds of meters away - even kilometers - and then drop them. Three tornado-hunter scientists from Denver were killed that way this last May (2013).

So. IF there was an erupting volcano, AND a tornado passed through nearby, it's conceivably possible that a tornado could pick up a bit of lava. However, lava is pretty dense. By comparison a car is much less dense (it has a lot of air space in it). More likely, the tornado would pick up ash and tephra (tephra is cooled lava filled with gas bubbles, so it is not very dense) and throw these around.

Something like this is not all that unreasonable, actually. There was a tropical cyclone (a Pacific hurricane) passing through the Philippines when Mount Pinatubo erupted in 1991. The effect of the hurricane-force wind, the HUGE amount of water that the cyclone brought with it, and the really huge volcanic eruption made quite a mess of the island of Luzon. It basically destroyed Clark airbase and badly damaged the nearby Subic Bay naval facility - and even though evacuations had been ordered, it still killed a lot of people.

~~~~~

Thorin later replied:

Thank you very much Jeff and it answers my question in great detail. Thank you for taking your time to answer my question and give me a very helpful answer.

~~~~~

Friday, November 22, 2013

What states are safe from earthquakes?

Where are you safe? Really nowhere. If you live in the Pacific Northwest, tornadoes are extremely rare, and hurricanes non-existent - but you are at risk of a large subduction earthquake and floods. If you live in the Southeast, you generally don't have to worry about earthquakes, but you are certainly living in Hurricane Alley. When I first took up my 5-year assignment to serve as chief scientist for volcano hazards in Vancouver, WA, in 2002, I was frequently asked the question: will we have a big eruption soon? I told everyone that I had voted with my feet, made an informed decision, and bought a house in Clark County. Two years later, of course, Mount St Helens erupted. While it briefly threatened the Johnston Ridge Observatory north of it, it was never really a threat to people in Clark County... though an ash-plume erupted on March 5, 2005 did apparently intersect an aircraft flight-path near Roseburg, WA. At least three Boeing 747 aircraft have lost all or almost all of their engines when they flew through a volcanic ash cloud. The aircraft flying over Roseburg was diverted to a nearby airport, thoroughly checked out, and found to be OK however.

Q: I saw on your website that 39 states are endanger of earthquakes, what 11 are not and why?
 Kaitlyn S, 8th grade Endeavor Charter School student


A: Hi, Kaitlyn,

If you go to this web-page you will see a map of earthquakes in the United States:



You can count 11 states that have no recent seismicity (no red circles) - but this doesn't necessarily mean they are earthquake-free. 

The longer answer to your question is that earthquakes happen where there is crustal movement: mountains rising (Hawaii and Utah, for instance), crustal slabs sliding past each other (California), or continents riding over oceanic plates (most of the West Coast). If you look at this map, you will see states that have no apparent earthquakes. This is because they are in the center of a very old, stable continental crust, and not on the tectonically active margins. However the map of RECENT seismicity could fool you into thinking that Oregon is relatively free of risk. In fact, the same subduction fault off the coast from northern California to British Columbia threatens the western sides of three American states and one Canadian province. This kind of fault may not rupture for centuries at a time. However, when it does break it will be a real attention-getter. 

One thing to keep in mind is that distance from a fault offers increasing protection: Western Washington State is at much greater risk than eastern Washington State, for instance. This is because the energy of the earthquake falls off with distance, just like sound does. Sit on the edge of your bed and have your brother kick the edge next to you. If he then goes around and kicks the other side, it will not feel nearly as uncomfortable to you. 
~~~~~